FC16 Xorg dumping - abrt[26059]: File '/usr/bin/Xorg' seems to be deleted

luminarycrush · #1 12th April 2012, 10:43 PM

I've been getting some weird, nasty X crashes the last two weeks or so... sometimes, the X session crashes back to the login screen, other times it hard locks X (sometimes I can SSH into the machine, see that Xorg is at 100% of a core, and I have to reboot the machine as it won't "kill" with any signal) or it hard-locks the machine and requires a cold boot.

This may seems to have started happening after a software update a couple weeks ago, which included a kernal and nvidia kmod update.

Here is part of the messages file around the time of a crash:

Apr 12 11:55:00 pangea abrt[26059]: File '/usr/bin/Xorg' seems to be deleted
Apr 12 11:55:00 pangea gnome-session[2216]: Gdk-WARNING: gnome-session: Fatal IO error 11 (Resource temporarily unavailable) on X server :0.#012
Apr 12 11:55:00 pangea abrt[26059]: Saved core dump of pid 1513 (/usr/bin/Xorg) to /var/spool/abrt/ccpp-2012-04-12-11:55:00-1513 (2412544 bytes)
Apr 12 11:55:00 pangea abrtd: Directory 'ccpp-2012-04-12-11:55:00-1513' creation detected
Apr 12 11:55:00 pangea systemd-logind[1293]: Removed session 2.
Apr 12 11:55:01 pangea abrtd: DUP_OF_DIR: /var/spool/abrt/ccpp-2012-04-05-10:51:37-1535
Apr 12 11:55:01 pangea abrtd: Problem directory is a duplicate of /var/spool/abrt/ccpp-2012-04-05-10:51:37-1535
Apr 12 11:55:01 pangea abrtd: Deleting problem directory ccpp-2012-04-12-11:55:00-1513 (dup of ccpp-2012-04-05-10:51:37-1535)

The file is still there:

# ls -la /usr/bin/Xorg
-rws--x--x 1 root root 1965144 Mar 8 15:33 /usr/bin/Xorg

# file /usr/bin/Xorg
/usr/bin/Xorg: setuid ELF 64-bit LSB executable, x86-64, version 1 (SYSV), dynamically linked (uses shared libs), for GNU/Linux 2.6.32, stripped

Now I can see the directory /var/spool/abrt/ccpp-2012-04-05-10:51:37-1535 but this doesn't appear in my list of ABRT 'not submitted' or 'submitted' reports.

I noticed this as well:

Apr 11 13:17:36 pangea kernel: [ 7629.507303] NVRM: GPU at 0000:04:00.0 has fallen off the bus.

This happened before a second crash today... but not before the first crash at 11:55.

That doesn't sound good. Kind of makes me think it's a hardware problem...but very strange this started happening shortly after a software update which included a kernel and nvidia-kmod update. Prior to that I FC16 was running happily for many months.

Any thoughts?

***DBelton*** · #2 13th April 2012, 01:57 PM

there were some issues with the nvidia driver and prelink which might be what you are running in to.

try removing the prelink from your binaries and see if that fixes your problems.

Code:

su -
(root password)

prelink -au

luminarycrush · #3 14th April 2012, 01:57 AM

OK, I tried the "prelink -au" and I'm still getting crashes - three today.

This last one was an Xserver-only crash - I didn't have to reboot this time.

Apr 13 17:28:36 pangea dbus-daemon[1262]: dbus[1262]: [system] Successfully activated service 'org.freedesktop.PackageKit'
Apr 13 17:29:21 pangea abrt[8188]: Can't read /proc/186/exe link
Apr 13 17:40:17 pangea abrt[9026]: Can't read /proc/122/exe link
Apr 13 17:43:57 pangea abrt[9309]: Can't read /proc/1571/exe link
Apr 13 17:43:57 pangea gnome-session[2447]: Gdk-WARNING: gnome-session: Fatal IO error 11 (Resource temporarily unavailable) on X server :0.#012
Apr 13 17:43:57 pangea systemd-logind[1244]: Removed session 3.
Apr 13 17:43:59 pangea acpid: client 1571[0:0] has disconnected
Apr 13 17:43:59 pangea acpid: client connected from 9319[0:0]
Apr 13 17:43:59 pangea acpid: 1 client rule loaded
Apr 13 17:43:59 pangea systemd-logind[1244]: New session 5 of user gdm.
Apr 13 17:43:59 pangea systemd-logind[1244]: Linked /tmp/.X11-unix/X0 to /run/user/gdm/X11-display.

Next are a very large number of "DEBUG" lines and finally the mention that this is a "DUP" ABRT report and it deletes the directory. I've attached the rest of the messages file.

luminarycrush · #4 16th April 2012, 04:43 AM

Another X crash which again didn't lock the OS, just crashed back to the GDM login screen.

Apr 15 20:31:36 pangea kernel: [33711.893417] NVRM: Xid (0000:04:00): 6, PE0001
Apr 15 20:31:36 pangea abrt[23458]: Can't read /proc/9319/exe link
Apr 15 20:31:36 pangea gnome-session[9561]: Gdk-WARNING: gnome-session: Fatal IO error 11 (Resource temporarily unavailable) on X server :0.#012
Apr 15 20:31:36 pangea systemd-logind[1244]: Removed session 6.
Apr 15 20:31:37 pangea acpid: client 9319[0:0] has disconnected
Apr 15 20:31:37 pangea acpid: client connected from 23463[0:0]
Apr 15 20:31:37 pangea acpid: 1 client rule loaded
Apr 15 20:31:38 pangea systemd-logind[1244]: New session 16 of user gdm.
Apr 15 20:31:38 pangea systemd-logind[1244]: Linked /tmp/.X11-unix/X0 to /run/user/gdm/X11-display.
Apr 15 20:31:38 pangea gnome-session[23486]: DEBUG(+): Enabling debugging
Apr 15 20:31:38 pangea gnome-session[23486]: DEBUG(+): GsmXsmpServer: SESSION_MANAGER=local/unix:@/tmp/.ICE-unix/23486,unix/unix:/tmp/.ICE-unix/23486#012
Apr 15 20:31:39 pangea gnome-session[23486]: DEBUG(+): GsmShell: Not connected to the shell

---------- Post added at 08:43 PM ---------- Previous post was at 08:36 PM ----------

ABRT this time found a crash in gsettings-data-convert, but it won't submit the backtrace....

warning: core file may not match specified executable file.
[New LWP 23713]
[New LWP 23724]
[New LWP 23725]
warning: Corrupted shared library list
Failed to read a valid object file image from memory.
Core was generated by `gsettings-data-convert'.
Program terminated with signal 5, Trace/breakpoint trap.
#0 0x000000367e04d313 in ?? ()

Thread 3 (LWP 23725):
#0 0x000000367c0e85c3 in ?? ()
No symbol table info available.
#1 0x00007f7c40001150 in ?? ()
No symbol table info available.
#2 0x00000000ffffffff in ?? ()
No symbol table info available.
#3 0x0000000000000003 in ?? ()
No symbol table info available.
#4 0x00007f7c40001150 in ?? ()
No symbol table info available.
#5 0x0000000000000001 in ?? ()
No symbol table info available.
#6 0x000000367e044fd8 in ?? ()
No symbol table info available.
#7 0x0000000000000080 in ?? ()
No symbol table info available.
#8 0x000000367e31e7e8 in ?? ()
No symbol table info available.
#9 0x000000367e31e800 in ?? ()
No symbol table info available.
#10 0x000000014800f450 in ?? ()
No symbol table info available.
#11 0x000000367e31e800 in ?? ()
No symbol table info available.
#12 0xffffffff7fffffff in ?? ()
No symbol table info available.
#13 0x000000367c809db0 in ?? ()
No symbol table info available.
#14 0x00007f7c4800f310 in ?? ()
No symbol table info available.
#15 0x00007f7c4800f450 in ?? ()
No symbol table info available.
#16 0x000000367e31f000 in ?? ()
No symbol table info available.
#17 0x0000000000000001 in ?? ()
No symbol table info available.
#18 0x0000000000000000 in ?? ()
No symbol table info available.

Thread 2 (LWP 23724):
#0 0x000000367c0e85c3 in ?? ()
No symbol table info available.
#1 0x00007f7c48001170 in ?? ()
No symbol table info available.
#2 0x000000000001d4a5 in ?? ()
No symbol table info available.
#3 0x0000000000000001 in ?? ()
No symbol table info available.
#4 0x00007f7c48001170 in ?? ()
No symbol table info available.
#5 0x0000000000000001 in ?? ()
No symbol table info available.
#6 0x000000367e044fd8 in ?? ()
No symbol table info available.
#7 0x00007f7c4fbf9000 in ?? ()
No symbol table info available.
#8 0x000000367e31e7e8 in ?? ()
No symbol table info available.
#9 0x000000367e31e800 in ?? ()
No symbol table info available.
#10 0x00000001023f1540 in ?? ()
No symbol table info available.
#11 0x000000367e31e800 in ?? ()
No symbol table info available.
#12 0x0001d4a57fffffff in ?? ()
No symbol table info available.
#13 0x000000367c809db0 in ?? ()
No symbol table info available.
#14 0x00007f7c48001150 in ?? ()
No symbol table info available.
#15 0x00000000023f1540 in ?? ()
No symbol table info available.
#16 0x000000367e31f000 in ?? ()
No symbol table info available.
#17 0x0000000000000001 in ?? ()
No symbol table info available.
#18 0x0000000000000000 in ?? ()
No symbol table info available.

Thread 1 (LWP 23713):
#0 0x000000367e04d313 in ?? ()
No symbol table info available.
#1 0x0000000000000000 in ?? ()
No symbol table info available.
warning: Corrupted shared library list
No shared libraries loaded at this time.
No symbol "__abort_msg" in current context.
No symbol "__glib_assert_msg" in current context.
rax 0x240d590 37803408
rbx 0x2 2
rcx 0x367c3b1730 234012481328
rdx 0x1 1
rsi 0x5 5
rdi 0x367c3b1700 234012481280
rbp 0x2 0x2
rsp 0x7fff1b16a820 0x7fff1b16a820
r8 0x240d530 37803312
r9 0x1 1
r10 0x1 1
r11 0x0 0
r12 0x4 4
r13 0x7fff1b16ace8 140733647858920
r14 0x0 0
r15 0x0 0
rip 0x367e04d313 0x367e04d313
eflags 0x246 [ PF ZF IF ]
cs 0x33 51
ss 0x2b 43
ds 0x0 0
es 0x0 0
fs 0x0 0
gs 0x0 0
No function contains program counter for selected frame.

luminarycrush · #5 16th April 2012, 08:54 PM

Apr 16 09:05:18 pangea kernel: [ 1634.869601] NVRM: Xid (0000:04:00): 6, PE0001
Apr 16 09:05:18 pangea gnome-session[2244]: Gdk-WARNING: gnome-session: Fatal IO error 11 (Resource temporarily unavailable) on X server :0.#012
Apr 16 09:05:18 pangea abrtd: Directory 'ccpp-2012-04-16-09:05:18-1448' creation detected
Apr 16 09:05:18 pangea abrt[4980]: Saved core dump of pid 1448 (/usr/bin/Xorg) to /var/spool/abrt/ccpp-2012-04-16-09:05:18-1448 (3899392 bytes)
Apr 16 09:05:18 pangea systemd-logind[1231]: Removed session 2.

---------- Post added at 12:54 PM ---------- Previous post was at 09:14 AM ----------

Apr 16 12:51:30 pangea gnome-session[2297]: Gdk-WARNING: gnome-session: Fatal IO error 11 (Resource temporarily unavailable) on X server :0.#012
Apr 16 12:51:30 pangea kernel: [ 7483.559991] plugin-containe[8240]: segfault at 7fef93d7e730 ip 000000367c80be66 sp 00007fef954fea40 error 6 in libpthread-2.14.90.so[367c800000+17000]
Apr 16 12:51:30 pangea abrt[11130]: Saved core dump of pid 1523 (/usr/bin/Xorg) to /var/spool/abrt/ccpp-2012-04-16-12:51:30-1523 (2371584 bytes)
Apr 16 12:51:30 pangea abrtd: Directory 'ccpp-2012-04-16-12:51:30-1523' creation detected
Apr 16 12:51:30 pangea systemd-logind[1239]: Removed session 2.
Apr 16 12:51:30 pangea abrtd: DUP_OF_DIR: /var/spool/abrt/ccpp-2012-04-16-09:34:02-4995
Apr 16 12:51:30 pangea abrt[11131]: Saved core dump of pid 6642 (/usr/lib64/seamonkey-2.8/plugin-container) to /var/spool/abrt/ccpp-2012-04-16-12:51:30-6642 (79503360 bytes)
Apr 16 12:51:30 pangea abrtd: Problem directory is a duplicate of /var/spool/abrt/ccpp-2012-04-16-09:34:02-4995
Apr 16 12:51:30 pangea abrtd: Deleting problem directory ccpp-2012-04-16-12:51:30-1523 (dup of ccpp-2012-04-16-09:34:02-4995)
Apr 16 12:51:30 pangea abrtd: Directory 'ccpp-2012-04-16-12:51:30-6642' creation detected
Apr 16 12:51:32 pangea abrtd: New problem directory /var/spool/abrt/ccpp-2012-04-16-12:51:30-6642, processing
Apr 16 12:51:32 pangea acpid: client 1523[0:0] has disconnected
Apr 16 12:51:32 pangea acpid: client connected from 11146[0:0]
Apr 16 12:51:32 pangea acpid: 1 client rule loaded
Apr 16 12:51:32 pangea systemd-logind[1239]: New session 5 of user gdm.
Apr 16 12:51:32 pangea systemd-logind[1239]: Linked /tmp/.X11-unix/X0 to /run/user/gdm/X11-display.
Apr 16 12:51:32 pangea gnome-session[11205]: DEBUG(+): Enabling debugging